rs256197642 SNP Detail

Summary

• ID
  rs256197642
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:65431406 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTAGCTGTG GTTGCTGGGG
  AGATTTTCTG ACTCTATCAG ACACATGGGT TCAAGGAGTG GCCAGAGCAT TGTGTACCTC
  TATTTTTCTA AATCAGTGAA GCTAGTTCTG CTAACAATGA AATCTATTTT GCCAATTTCA
  GGGCTTCTGT GACCTTTTAC ATTCTGTCAG GATCTTTCAG CTGCTCTGCC CTCTTTGTGT
  R
  GATGTTTCTA TGAGAGCACA AGCTAAGTTA AGTAGCTGAC AGAAACAGAC TTGTTTGTTT
  ATTGTCTCAC CTTGTGGAGG TCAGACTCCC AAGGTAGGCT GTTTTCAGGG TTAGATCATT
  CTGAAGGATC TGAGGAGATT TTGTTCTAGG CTCTTCTCCA AGTGGGTAGG GTCAATTATT
  TGTGTTCTTT GGCTATTAGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324073118	CHEV_12_66485619	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs256197642					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:65431406 () rs orientation: forward

Symbol	Name	Function Class
Rr260997	regulatory region 260997	795 bp proximal
Rr267825	regulatory region 267825	1207 bp distal
Rr267826	regulatory region 267826	1196 bp proximal
Rr387347	regulatory region 387347	606 bp upstream