rs256199047 SNP Detail

Summary

• ID
  rs256199047
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:145814518 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ctcagaggt taagaacact cactggctgc
  tctttcagag gtcctgagtt taattaccag caaccacatg gtggctccca tctataatgg
  gatctgatgc cctcttctgg CACATAGATC atatatgtat gtatatatat atatatatat
  R
  tatatatata ATACACAAAA TAAATAAATC TTTTTTTAAA ATGTCAACAA TCATACAGTA
  AAATCGCGGT GAGCATTGCA TGAACTTCAG TACCTGGTGC CAATGTCTCA GTGTGCTGAG
  CATTGTTTTG TTTGTAGATC AGGGCAGACT                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320539195	CHEV_2_145798334	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs256199047					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:145814518 () rs orientation: forward

Symbol	Name	Function Class
Cfap61	cilia and flagella associated protein 61	Intron
Rr374013	regulatory region 374013	226 bp downstream
Rr566617	regulatory region 566617	1477 bp distal
Rr566618	regulatory region 566618	566 bp distal