rs256350831 SNP Detail

Summary

• ID
  rs256350831
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:28226538 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CTTGAGGAG GGGGCCCAAG GGGGAGCGTA
  CCCCGCCTCC AGGCACCCTG TCCCGTAGTA CAGCTTTAAA ATCCTGAGAA GTTTGTCATA
  GGACAGCCTC ATCACGCATG CGCATAGGCA AAGTTGACTT TTTTTTTCTC TCCCCCCCCC
  M
  CCCCCCTTTG CCTCTCCAGC CGTGTTTGGT TCTGCAACTT TAAAAATATT TTTTTTTCGC
  TGAGAACACC AAGGGAAAGA GGAGTCTGGA GAGAGGGAGG GCGAAAGTGA GGGAGCTGGT
  CAGGAGGGCC GGGGGTGGGG GGCACGCGGT                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324572544	CHEV_14_29317767	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs256350831					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:28226538 () rs orientation: forward

Symbol	Name	Function Class
Cpgi6258	CpG island 6258	75 bp proximal
Rr489628	regulatory region 489628	within coordinates
Rr489629	regulatory region 489629	476 bp proximal
Rr489630	regulatory region 489630	666 bp proximal
Tssr124778	transcription start site region 124778	within coordinates
Tssr124779	transcription start site region 124779	53 bp upstream
Tssr124780	transcription start site region 124780	97 bp upstream
Tssr124781	transcription start site region 124781	155 bp upstream
Tssr124782	transcription start site region 124782	215 bp upstream
Tssr124783	transcription start site region 124783	882 bp upstream
Tssr124784	transcription start site region 124784	914 bp upstream
Tssr124785	transcription start site region 124785	961 bp upstream
Tssr124786	transcription start site region 124786	1025 bp upstream
Tssr124787	transcription start site region 124787	1178 bp upstream
Tssr124788	transcription start site region 124788	1200 bp upstream
Tssr124789	transcription start site region 124789	1236 bp upstream
Wnt5a	wingless-type MMTV integration site family, member 5A	169 bp upstream