rs256367903 SNP Detail

Summary

• ID
  rs256367903
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:70703521 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTGTGTGTC TGTATATAAC
  ATAACTGTTT ACACATAATA CACTGAAATG GAGCCCTTCC TTGTTACTTC ATACCATCCT
  CTGTGCTTCC TTCCTCAGGG GCTGATGCTG CACCAACTGT ATCCATCTTC CCACCATCCA
  GTGAGCAGTT AACATCTGGA GGTGCCTCAG TCGTGTGCTT CTTGAACAAC TTCTACCCCA
  R
  AGACATCAAT GTCAAGTGGA AGATTGATGG CAGTGAACGA CAAAATGGCG TCCTGAACAG
  TTGGACTGAT CAGGACAGCA AAGACAGCAC CTACAGCATG AGCAGCACCC TCACGTTGAC
  CAAGGACGAG TATGAACGAC ATAACAGCTA TACCTGTGAG GCCACTCACA AGACATCAAC
  TTCACCCATT GTCAAGAGCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321815803	CHEV_6_70676531	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs256367903					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:70703521 () rs orientation: forward

Symbol	Name	Function Class
Gm68839	predicted gene, 68839	within coordinates
Igk	immunoglobulin kappa chain complex	within coordinates
Igkc	immunoglobulin kappa constant	within coordinates
Rr158	regulatory region 158	586 bp distal
Rr150202	regulatory region 150202	within coordinates
Rr399684	regulatory region 399684	1102 bp downstream
Rr399685	regulatory region 399685	690 bp downstream
Rr399686	regulatory region 399686	within coordinates
Tssr1880	transcription start site region 1880	313 bp upstream
Tssr56956	transcription start site region 56956	704 bp downstream
Tssr56957	transcription start site region 56957	65 bp downstream
Tssr56958	transcription start site region 56958	49 bp downstream
Tssr56959	transcription start site region 56959	31 bp downstream
Tssr56960	transcription start site region 56960	16 bp downstream
Tssr56961	transcription start site region 56961	within coordinates
Tssr56962	transcription start site region 56962	3 bp upstream
Tssr56963	transcription start site region 56963	52 bp upstream
Tssr56964	transcription start site region 56964	67 bp upstream
Tssr56965	transcription start site region 56965	73 bp upstream
Tssr56966	transcription start site region 56966	84 bp upstream
Tssr56967	transcription start site region 56967	99 bp upstream
Tssr56968	transcription start site region 56968	123 bp upstream
Tssr56969	transcription start site region 56969	159 bp upstream
Tssr56970	transcription start site region 56970	172 bp upstream
Tssr56971	transcription start site region 56971	192 bp upstream
Tssr56972	transcription start site region 56972	218 bp upstream
Tssr56973	transcription start site region 56973	256 bp upstream
Tssr56974	transcription start site region 56974	288 bp upstream
Tssr56975	transcription start site region 56975	321 bp upstream
Tssr61321	transcription start site region 61321	28 bp upstream
Tssr61322	transcription start site region 61322	110 bp downstream
Tssr61323	transcription start site region 61323	125 bp downstream
Tssr61324	transcription start site region 61324	215 bp downstream
Tssr61325	transcription start site region 61325	281 bp downstream
Tssr61326	transcription start site region 61326	316 bp downstream
Tssr61327	transcription start site region 61327	330 bp downstream
Tssr61328	transcription start site region 61328	421 bp downstream