About   Help   FAQ
rs256434592 SNP Detail
Summary
  • ID
    rs256434592
  • Variation Type
    SNP
  • Alleles
    C/G
Genome Location and Flanking Sequence
  • Location
    Chr12:83572534 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                      GAGCAGAGA TGAGAGGAAG CCTTTAAACA
    TAAACTAGAC ATCTGTGATG TCCCCAAGGA TGAGGTGGAC ATCTGGGGGG GAGGGGGGTG
    TCTTGGAAAG ACATGGGGAC AGGTGTTTAT TTCTCTGAGA CAAGAGCAAG AATTTGTgcc
    S
    ggtgtggtag cgcacacctt taatcccagc acttgggagg cagaggctgg cggatttctg
    agttcaaggc cagctggtct acaaagtaag ttccaggaca gccagggcta tacagagaaa
    ccctgtctcg aaaaaccaga aAAAAAAACC                                 
    
    S = C/G
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
LG/J
SM/J
ss324113670 CHEV_12_84866710 CHEVERUD SCREENING_POP f SNP G C
SNP Consensus Information
SNP Consensus Type
LG/J
SM/J
rs256434592 SNP G C
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr12:83572534 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Dcaf4 DDB1 and CUL4 associated factor 4 within coordinates
Rr257993 regulatory region 257993 1134 bp distal
Rr261746 regulatory region 261746 1467 bp proximal
Rr265648 regulatory region 265648 266 bp proximal
Rr387528 regulatory region 387528 1165 bp upstream
Tssr114259 transcription start site region 114259 283 bp upstream

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
12/17/2024
MGI 6.24
The Jackson Laboratory