rs256435024 SNP Detail

Summary

• ID
  rs256435024
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:52153862 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    tactcaact ccagccctcc ctaaaagcac
  actatgttct taaccactaa gctatctctc catcctcAAT ATTATAATCT TTAGTAGAAT
  TTTGCACGTT GTACCACTTG TAGTTAATGG AAAGACTGTA GTTTGGCAGT ACATGGCCAT
  Y
  CTCCAAAGAG TGTATTGGGA AGAAAAATAT TGTGTGCACA CAGCAAGTTT GAAATATAAC
  ATGTACCTTG TGTTTTCACA AGCTGCAAGA TACAGGGCTC CTATAGAATT GCTATGAGCT
  GAGAAGAAAA CCAACACCAA GGTAAGGTAT                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319719440	CHEV_1_52171547	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs256435024					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:52153862 () rs orientation: forward

Symbol	Name	Function Class
Cpgi240	CpG island 240	686 bp distal
Gm28177	predicted gene 28177	within coordinates
Gm31812	predicted gene, 31812	804 bp upstream
Rr366897	regulatory region 366897	105 bp downstream
Rr410805	regulatory region 410805	963 bp distal
Rr410806	regulatory region 410806	345 bp distal