rs256485679 SNP Detail

Summary

• ID
  rs256485679
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:60959210 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACCAAAAGA AATGCTTCCA
  ACCCACCAGC CATGAATGAG ATTCCAGTCT ACCTTTACAG AAGGGGTAGT ATACTTACTC
  TCTGGCTGGA AGATAAGCTC ATACACCCAG ACTATCAGCA GAGTACACAG GACACTCCAC
  GCAATGAGCT GCCAGGGCTC ATATTTGGTG CAATATCCAT TCACATAATT CTTGGCTTTT
  R
  TGGAATATGA TTCCAAAATC TCCAAATAAG GCTCGAAGTC CTTCTAGAAA TATAAGAAGA
  AAAACAGAAA CATTACATTC AGAGAAAGGA AGTCTGCTCT TGGTTTGTTC AATTCTCATT
  TTTCAAGGGC AAAGCTGTTA CTCAAGATGA GGGCTCCACC TCAGCAATAA TCTTATCATC
  TTCTACAGCC CTCAAAGTTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323327701	CHEV_10_60586179	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs256485679					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:60959210 () rs orientation: forward

Symbol	Name	Function Class
Gm55864	predicted gene, 55864	1706 bp downstream
Rr228136	regulatory region 228136	1010 bp distal
Rr401931	regulatory region 401931	1296 bp downstream
Sgpl1	sphingosine phosphate lyase 1	within coordinates