rs256502640 SNP Detail

Summary

• ID
  rs256502640
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:11685486 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCGCCCTGG AACTCTCAGG
  GGTTGCGCTG CCGCTGCCGA CCGCGCTCTC CAGACACCGT GGGGTGCGCT CTGACCCTAA
  CAGCACACCA CGCGGAAAAT GGCGCCTTAA AGTGCCCGCG CCCACCTTGC CGAAGTGCGC
  AGCCCAGTGC ACGGGCGTCC AGCCGTAGAA GGAGTCCTCA GCGGCCAGGT GAGCGCGCGG
  Y
  GTGTGTGGCA GCAGCGAACA GAGCGCGACC AGGTCCCCGT CCCGGCAGGC GCGGTGCAGC
  GGGAAGCGGA GCGACAGCAG CTCCTCGCTG GAGAAGCCTG CCTCCACGGC CGCGCCCGCT
  CCCGCTGACA TGATGGGTCG CTAGGAAGCA CGCGACTGAT CGGCCAGAGG AATGTGCCGG
  TGAAGGCCTG CGAAGCTGCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322492727	CHEV_8_11635486	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs256502640					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:11685486 () rs orientation: forward

Symbol	Name	Function Class
Ankrd10	ankyrin repeat domain 10	within coordinates
Cpgi20087	CpG island 20087	within coordinates
Gm45592	predicted gene 45592	1796 bp upstream
Gm64331	predicted gene, 64331	within coordinates
Mir7238	microRNA 7238	208 bp downstream
Rr186041	regulatory region 186041	within coordinates
Rr400761	regulatory region 400761	232 bp upstream
Tssr80389	transcription start site region 80389	438 bp upstream
Tssr80390	transcription start site region 80390	407 bp upstream
Tssr80391	transcription start site region 80391	155 bp downstream
Tssr80392	transcription start site region 80392	207 bp downstream
Tssr80393	transcription start site region 80393	243 bp downstream
Tssr80394	transcription start site region 80394	259 bp downstream