rs256543408 SNP Detail

Summary

• ID
  rs256543408
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:97114757 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTTCAAATT TGATTCCCGA
  ATCAATGCAT TCTGGCACCA CTGATTGGTC AACATTATAA ACATTGTTTT GCCCTTTGTG
  ACAGAACTGT CCTTCCATGG TATTGTTGCC CATCGGTTTC TGGAACAGAA TCCCCAGTAG
  TCCACCCCAT CATTCTTTTT TTAGAAAGAT AGGTCATGAA ATACCATGGG TATACACTTA
  Y
  TGCTGCTCTT CAAGTGAATA GGTTCTTGGT CAGAAATGAT GTGTGTGGGA CACTATGATG
  ATGGCAAGAC ATTTGCAATT CTATTGAATT CTGTTGACAG CAATTCAAGA AAAGCACAGA
  GAAGACAAAT TCCCATCCAG GGTATATTCC TGGTCTACGA GGACATGTTC TTTCCCCCTT
  TGTGATGAAG TGGACACGCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323117105	CHEV_9_97133123	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs256543408					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:97114757 () rs orientation: forward

Symbol	Name	Function Class
Gm29240	predicted gene 29240	1111 bp downstream
Tssr2982	transcription start site region 2982	1463 bp downstream