rs256563315 SNP Detail

Summary

• ID
  rs256563315
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:134270959 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GACCCCACCC TCAAGGCCTG
  AACCCTTGAG GTTTCGGATT TTAGTGAATG CTGGAGGCCA CGTGGGAGGT GAGCCCTGGC
  AGCTTCCCTT TTGAGGGACT GAAGTTCCTT ATCAGTGAAA GGAGCCTGTG ACTTTCTATG
  AATCAGTGGC TGAATTGCTA GAAATCTTAG TTGTATATTA TCTTGAACTG GGGAGGTTCT
  S
  TCTCACCTTC CCCATCCAGG AGCTCCTGGC TATTTAAGCT GCATTCTGGA CGGGTTGATA
  TAACTGCTCC AGGCTGGGGT GGCCCTGTCT ACAGCAGGTA GGCACCTGAC CTTTCCAATT
  CTAGTTGAGT TGGCCCCTCT CTGGCTCTGA CATGCAATCT TACACAATGT AGCCTTCATT
  CTTTTAAACT TTCATTCCTT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322457590	CHEV_7_141860913	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs256563315					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:134270959 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19845	CpG island 19845	743 bp proximal
Dock1	dedicator of cytokinesis 1	1457 bp upstream
Rr656983	regulatory region 656983	368 bp proximal
Rr656984	regulatory region 656984	967 bp proximal
Rr656985	regulatory region 656985	1468 bp proximal
Tssr69615	transcription start site region 69615	462 bp upstream
Tssr69616	transcription start site region 69616	1420 bp upstream
Tssr69617	transcription start site region 69617	1437 bp upstream