rs256598287 SNP Detail

Summary

• ID
  rs256598287
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:119182011 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTTTTGTTTT TGAGACAGGG
  TTTCTCTGTG TAATAGAGCC CAGCTATCCT GAATCTTGCT TTGTAGACCA GGCTGGCCTA
  GAACTCACAG AGATATCCCA AGTGCTAGAA TTAAAGGCAT GTGCCACTGT GCCTGACAAA
  ACCAGTAATT ATTAAATAGA GGATAAATTT AAGCCAGGCA CTGGTATATG CCTGTAAGCC
  Y
  AACACCTGCA AAGGGAAGTG GAGGCAGGAG AGTTCATTCT CTTGAGAACG TAGGAGTTTG
  AGGCAAGCCT GAGTTTCAAG AGATTCTCTG GAAGACACCT AGGAAACACA CATACACACT
  GGGATTCCTG ATTGTGCGAA TGCGCAGGTC TCAGCATCTG TATGTTTCTT CTGTCTGTTT
  TGTCCTGTTC TGATGTGTTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323218979	CHEV_9_119262063	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs256598287					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:119182011 () rs orientation: forward

Symbol	Name	Function Class
Rr688469	regulatory region 688469	539 bp distal
Rr688470	regulatory region 688470	923 bp distal
Rr688471	regulatory region 688471	670 bp distal