rs256630516 SNP Detail

Summary

• ID
  rs256630516
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr13:4107870 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGGCAGCAT CCAGGCAGGC
  ATGGTTCAGG AGTTGCTGAG AGTTCTCCAT CTTCATCTGA AGACTACTAG CAGAATACTG
  ACTTCTAGGC AGCTAGGATG AGGGTCTTAA AGTTCATGTT CATAGTGACA CACCTACTCC
  AACAGGGACA CACCTACTCC AACAGGAACA CACCTACTCC AACAGGGCCT TCTCCAACAC
  Y
  TTCTAATAGT GCCACTCCCT GGGGCACTAT TATACTATAC TTCCACTATA GTATTCATCG
  GGGCGTCTTA AAAGTGCTAT TCACCATGTC CAAGATATGG AATCAGTCTA GGTGCCAATC
  AATGGAGAAA TGGGTAAAGC CATGTGTGGT ATCTATTTAA GATAGTGTTT TGCTGTGGAT
  GGCTCTGTGC TGCTTGTATT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324212491	CHEV_13_4057116	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs256630516					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:4107870 () rs orientation: forward

Symbol	Name	Function Class
Akr1c14	aldo-keto reductase family 1, member C14	Intron
Rr387869	regulatory region 387869	1819 bp downstream
Rr474440	regulatory region 474440	513 bp proximal
Rr474441	regulatory region 474441	1566 bp proximal
Tssr118214	transcription start site region 118214	1695 bp upstream
Tssr118215	transcription start site region 118215	1717 bp upstream
Tssr118216	transcription start site region 118216	1801 bp upstream