rs256635486 SNP Detail

Summary

• ID
  rs256635486
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:156958434 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTTCTTCAGG GACGAGACCA TAGTTCTTCA TGACAAGTTT
  GAGTTCATTA GAATTGACCA GATGCTCAAA CATCTCAATG GAGCCCTGTT CGTGCTGGGG
  R
  AAGTCAGTAG AATACGGCTT AGTACAGGTT CTCAGCCACC GGGGGCTCTA ATGAAACAGG
  CTGTTCTGGA TTCTAGGTCC TGCTCAGGTG AAGTCCCAC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320584270	CHEV_2_156942250	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs256635486					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:156958434 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr568435	regulatory region 568435			1554 bp distal
Rr568436	regulatory region 568436			440 bp proximal
Rr568437	regulatory region 568437			613 bp proximal
Rr568438	regulatory region 568438			1014 bp proximal
Samhd1	SAM domain and HD domain, 1			Intron
				Splice-Site