rs256640267 SNP Detail

Summary

• ID
  rs256640267
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:24909605 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AGGGGTACT GTCTGGGAAG CAGAGTCCAC
  TGTGGCCAGC AGAAGTTAAG GTTGAGCATG CCTGTTCTCC TCAGGCCAAG TCATTTCTTC
  CAAAAGCCCT TTCCATCTCT GGTCTGGGTT GATCTGTAGC TAATTAATCC TGAGTTCTGG
  R
  AGGGGAGAAT TACCAGAGAT AAGATCTTGT CCCAGCTGTT GCCTAATTAT CCTGACCTCT
  GCTGGGATTC CTCTGCCCCA CAGCCTGACT AACAGAGCCA CTTGATGCTC TTTCAGTGCC
  AGGCTGGTAA GAGACTGAAT GGCTTCACCT                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325333041	CHEV_17_24827576	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs256640267					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:24909605 () rs orientation: forward

Symbol	Name	Function Class
Cpgi8738	CpG island 8738	392 bp distal
Rr339325	regulatory region 339325	within coordinates
Syngr3	synaptogyrin 3	682 bp upstream
Tssr146762	transcription start site region 146762	744 bp upstream
Tssr146763	transcription start site region 146763	671 bp upstream