rs256674379 SNP Detail

Summary

• ID
  rs256674379
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:128846423 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATGCAATGA GGTGTACCTA
  TCCCACTAAA AGCCCATAGG GGGGTGTGGC TATCCCACCC AAACCGGCTG TGAAATCCAG
  GCAGCTCAGA AGAGAGTCAG AACTCTTAAA CCTTGCATGC TTGAGGCTGC GGGAGGGGGC
  CTCTGGGGCC ATCCAGTACT GCACAGAGAA TCGAGACTCC CAATTATGTG CAAGGGGCCC
  Y
  AGAGGGATAG CCATGGGAAG CAGCCACAGA GAGTGGCTAC AGGGGGGCTG GGAGGGGAGG
  GGCTGCAGGG GGCATGCAGC GGATGTCCAG TTACAGATGC AGGAAGTTAG CCCCGCCTTG
  TGTATGGACG GCCTCGCTTA TGCCCCAGAG ACTATTAGGC AGCTGCAGAA CAGGAGGGAG
  GTACCATGGA CGCTGCGGGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321688100	CHEV_5_129275234	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs256674379					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:128846423 () rs orientation: forward

Symbol	Name	Function Class
Gm42875	predicted gene 42875	674 bp upstream
Rimbp2	RIMS binding protein 2	within coordinates
Rr621176	regulatory region 621176	within coordinates
Rr621177	regulatory region 621177	131 bp proximal