rs256696482 SNP Detail

Summary

• ID
  rs256696482
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:59022825 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCAGTCTTTC TTACTGCAGC
  GTCACACAGG CCTAAAGCCA TAGGCCATAA ACCGCAACCT CTGAACGATG AGCTGAAATA
  GAGCTTTCTC TGTTGGGGTG AAGGAAATAT GACTAACATT TGGATAATGC CATTCTGTTT
  TGGACCTCAT ACAACCAAGG CACATAAAAC AGGCAATAGA TGTTACACAA AAAGTAGATA
  Y
  AGTCAAAAAA GACTATCTGC CTTTCTCCCA AATTACCTCC ACTGGTCTCT TGATGTGACA
  CAAGATCAAA GTAAACTTTT CACTGCTCTA TCAATAACCT GTCCTCTGTG TACATGTTGT
  AAAATGTTCA CTGTGTGGCT AACAGCTTGC TATGCATAGT GAGGAAACTT AAATTTTGTG
  CTTGATGCAA TTGTCTCGTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324055322	CHEV_12_60077026	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs256696482					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:59022825 () rs orientation: forward

Symbol	Name	Function Class
Rr256936	regulatory region 256936	625 bp distal
Rr256937	regulatory region 256937	976 bp proximal
Sec23a	SEC23 homolog A, COPII coat complex component	within coordinates
Tssr116440	transcription start site region 116440	315 bp downstream