rs256700518 SNP Detail

Summary

• ID
  rs256700518
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:62314055 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACTTCATCC TTCGCATTTC
  TTTAGACCTA GAAGTATACA CATTTGGGTA GGGTTGGGAA GGTGTAATTC TTAATTCTTG
  GGAGTGTGGC ATCATTTTCT TGTTATATGG CGGATATCTG GGGATGTGCT GAAAATAAAA
  ATGCAAGTGC AACCATTTTC AGTTTTACAA TTTAAAAAAT TAAACTACAT TATTTATGTT
  M
  TGTGCATGGG AGTCTTATCT CTACATTTGT CTGTGCACCA CATTTGTGCC TGTTTTGGAG
  GTCAGGACAA AGCATCAGAT TCCCTAGGAC TGAATATACA GATAGTATCA GCTCACAAGC
  TGCCTTTGTG AGTGCTGGGA ATTGAACCCT GGTTCTCTGG AAGACTAGCC AAAGCTCTTA
  AGCACTGAGC CGTCTTTCCA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325649290	CHEV_18_62340638	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs256700518					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:62314055 () rs orientation: forward

Symbol	Name	Function Class
Adrb2	adrenergic receptor, beta 2	1025 bp upstream
Cpgi10125	CpG island 10125	364 bp distal
Gm9949	predicted gene 9949	within coordinates
Rr393783	regulatory region 393783	within coordinates
Rr539065	regulatory region 539065	1961 bp distal
Rr539066	regulatory region 539066	779 bp distal
Rr539067	regulatory region 539067	159 bp distal
Tssr151487	transcription start site region 151487	802 bp downstream
Tssr151488	transcription start site region 151488	1942 bp upstream
Tssr153623	transcription start site region 153623	998 bp upstream