rs256728303 SNP Detail

Summary

• ID
  rs256728303
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:89805771 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCCACCATT GACTGAGCTT
  GAAGTCAGAC ACCTGTGCCC AGCACAGAAG TGGTTTATGA TGTAATTTTC TGGGGACTGT
  ACTATTGATT TGATTCTTTC ACCCCAGAAT TTAGATGAGT TCTTCGTCAA TTTTCATGAA
  GTAATTAAAG ATACGTTGAA TTGGTACCCA GTCCCCCCCC CACCCCCCCA CCCCCGCCCC
  G
  GAGATGTTCT CCTGGTAGGT TTCCCGCTCT GTCCTTCCAG AGTGCCTGAT GGCTTCGAAC
  CATTTTTTTT TGTTGTCGAT GTTGGTTTGT TTGTAATTGG CTGGCAAATA AGGCTTTGTA
  GGGTTTGTCT CCTTATCATA TCCTAGGCCT AGGTTTTGTT ATGCCACACA AAATCCTTTT
  CAACTGAGCA CTTTAAAATA                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	BUB/BnJ	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10SnJ	CBA/J	CE/J	CZECHII/EiJ	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	LG/J	LP/J	MA/MyJ	NOD/ShiLtJ	NON/ShiLtJ	NZO/HlLtJ	PL/J	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SPRET/EiJ	ST/bJ	SWR/J
ss378418481	MGP_WTSI_9_89818556	EVA_MGPV3	EVA_MGPV3	f	SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	BUB/BnJ	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10SnJ	CBA/J	CE/J	CZECHII/EiJ	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	LG/J	LP/J	MA/MyJ	NOD/ShiLtJ	NON/ShiLtJ	NZO/HlLtJ	PL/J	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SPRET/EiJ	ST/bJ	SWR/J
rs256728303					SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss378418481	MGP_WTSI_9_89818556	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:89805771 () rs orientation: forward

Symbol	Name	Function Class
D9Mit157.1	DNA segment, Chr 9, Massachusetts Institute of Technology 157.1	803 bp distal
Rasgrf1	RAS protein-specific guanine nucleotide-releasing factor 1	within coordinates
Rr205313	regulatory region 205313	1163 bp proximal