rs256736702 SNP Detail

Summary

• ID
  rs256736702
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:99943364 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATATTCAAGG TGGCTACATC
  CAAAGATGAG AAGCCATGCA TGACTAAAGA CAAGCATGAG CCTCTGACTT CCCAATGCCT
  GTCAGACTGC TCCAAAGCAC TGGCTTTCCA GCAAAGAGCT GCTTCCTCAA CCTGCCTTCT
  TCTCCATCCA AGGAAGCCTT GCTTTGAGCA CAGGTTGAAT ACCTGCAGCA TCCTCCAACC
  C
  CTTTGGTCTT ATCTATGGGC TGCCCAGTGT AGCCCCCATA GAGGCCTTCA CCAAAGAAAG
  AATGTTTGGT TGCTCTATAG GAGAAGATTT GCAGGTGTGG TCGACCAGAA GGACAAAAAT
  AAGATCCTAT CAGTACAGAG AGATCAAAGA CGGAGCCAGA TGGAGGCCAG GAGGAGTCCG
  TACAGCGAGA AAGACAAGAA                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323830628	CHEV_11_99913852	CHEVERUD	SCREENING_POP	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs256736702					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:99943364 () rs orientation: forward

Symbol	Name	Function Class
D11Dcr21	DNA Segment, Chr 11, Derry C. Roopenian 21	1517 bp distal
D11Mit123	DNA segment, Chr 11, Massachusetts Institute of Technology 123	1502 bp distal
D11Mit123.3	DNA segment, Chr 11, Massachusetts Institute of Technology 123.3	1651 bp distal
Gm11571	predicted gene 11571	within coordinates
Krt31	keratin 31	1987 bp upstream
Tssr104894	transcription start site region 104894	423 bp downstream
Tssr104895	transcription start site region 104895	273 bp downstream
Tssr104896	transcription start site region 104896	246 bp downstream
Tssr110726	transcription start site region 110726	1981 bp upstream