rs256739762 SNP Detail

Summary

• ID
  rs256739762
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:134591837 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATCTCTTGTG AGTTTGAAGA
  CTGCCTGGTT TACAGAGCAA GTTCCAGGAC ATCTAGGGTT ACACAGTGAG TCCTGTTTTG
  AAATAAAAAA TGGATTAAAG GTATGTCTTT TTACTTCAGT GATCCTGATT AGAAGTGGAT
  CTTTCCACTT CAAATTAAGC AAAACAAACA AACAAACAAA CAAACAAAAA CACACACACA
  M
  AAAAACACCC ACACACAAAA CAAAACAACA ACACCAAAAA CATCAAAAAA AAAAAAAGCA
  AAACAACAAC AACAAACCCT TCACAGGTGC CCCTCCATTT TGGGTTTTAG TTAATCTCAG
  ATATAGACAA GTTGACAACC ATGAAGATGT GGCCTTGTGA AGGAGGTATG GTTCTTGGAG
  TGGGTTTTAA GGTTACATGC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129P2/OlaHsd	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CZECHII/EiJ	JF1/MsJ	LP/J	MA/MyJ	MOLF/EiJ	NON/ShiLtJ	NZW/LacJ	PWK/PhJ	RIIIS/J	SEA/GnJ	SPRET/EiJ	SWR/J
ss351523222	MGP_WTSI_1_136560676	EVA_MGPV3	EVA_MGPV3	f	SNP	C	C	C	C	C	C	C	C	C	C	C	C	A	C	C	C	C	C	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129P2/OlaHsd	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CZECHII/EiJ	JF1/MsJ	LP/J	MA/MyJ	MOLF/EiJ	NON/ShiLtJ	NZW/LacJ	PWK/PhJ	RIIIS/J	SEA/GnJ	SPRET/EiJ	SWR/J
rs256739762					SNP	C	C	C	C	C	C	C	C	C	C	C	C	A	C	C	C	C	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss351523222	MGP_WTSI_1_136560676	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:134591837 () rs orientation: forward

Symbol	Name	Function Class
Rr418971	regulatory region 418971	824 bp proximal
Syt2	synaptotagmin II	Intron