rs256768963 SNP Detail

Summary

• ID
  rs256768963
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:70987974 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGGCCGTGC ACAATATGCA
  GATCTGAAGG TCACAGGTGC TCTGCCACAC CTTGCCTCTG CTGTGTGACT GCTGTCTGCT
  CTCTCTGCCT CTTTCTCTTT TGATAACCAG GAAAGGGTGA AGGTATCCTG CCTTCACAAA
  GTCAGCTCCA CCTTGCAAGG ACTCACACCT TCTGTGCACG CTCTGACCAG GCAAGTGAAA
  R
  TCCATGGAAA CACTGCCATT GGGATCCGGG ACTGAGGCGC CAGGCATGAG AAGCCTGCCT
  GTGGCCTCAG GCACTAAGCT TGTCCTCTCT TCCTGAATAG CGTTCTGTCT ATAATGTTAT
  CATCTTGGAT AACACTTCGT TAGTGCAATA AACGTGTCCC GAGTGGCAAG GCTCGATTGC
  TCAGCCTGCT CCATGCTAAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324417460	CHEV_13_70978733	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs256768963					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:70987974 () rs orientation: forward

Symbol	Name	Function Class
Adamts16	ADAM metallopeptidase with thrombospondin type 1 motif 16	within coordinates
Cpgi5821	CpG island 5821	1382 bp proximal
Gm36529	predicted gene, 36529	595 bp upstream
Tssr123158	transcription start site region 123158	1848 bp downstream
Tssr123159	transcription start site region 123159	1874 bp downstream
Tssr123160	transcription start site region 123160	1907 bp downstream
Tssr123161	transcription start site region 123161	1935 bp downstream