rs256777781 SNP Detail

Summary

• ID
  rs256777781
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:84588164 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCCCAGGCT GGGGCCAAGG
  CCGCTTGTTC TTAGGTCCAG TGTTGCTATG TCATCTTTTT TTGTTTGTTT GTTTTTTTTG
  AGACAGGGTT TCTCTGTATA GCCCTAGCTG TCCTGGAACT CACTTTGTAG ACCAGGCTGG
  CCTTGAACTC AGAAATCCTC CTGCCTCTTC CTCCCAAGTG CTGGGATCAA AGGCGTGCGC
  Y
  ACCATGCCTG GCTATTGCTA TGTCATCTTA ATGGAAGGGC CTAGAGCACA TAAGGATGTC
  CCGAGACCTT AATGAGTGAT ACTTAAGCCT AAGACGAACC CTGAGAGTCC CTGGTCCTGG
  CCCTGGCATA GGCATTGACC CCATGCAGCC AGGAACAGAA AGGGGTCACG AGATCTACTG
  ATCCTGCTCT TTGTTTGGTA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325039428	CHEV_15_84534393	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs256777781					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:84588164 () rs orientation: forward

Symbol	Name	Function Class
Prr5	proline rich 5 (renal)	290 bp downstream
Rr304870	regulatory region 304870	1564 bp distal
Rr304871	regulatory region 304871	164 bp distal
Rr304872	regulatory region 304872	1837 bp proximal
Rr314877	regulatory region 314877	1365 bp distal
Rr314878	regulatory region 314878	1401 bp proximal
Rr404546	regulatory region 404546	1622 bp downstream