rs256956277 SNP Detail

Summary

• ID
  rs256956277
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:4762452 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGGAACAGT CCTGCTGTTA
  GGACATACAC TTGTTCCCCA GGATTGTGAC ATCACTGGGA ACATGAGGCC ATACAGCTGC
  TAGACTCTAA GGTAACCGAC CTGCCAGGCA GTGGTACTTC CTGCCACGGT CTCTGGTGAA
  GCAGCCTACA GACCCTGCCA TGGTCTCCCC ATCTACTTAG CACCCTGTGT GTGCCCTTGG
  K
  TTGTTTCTGT GCAGGGAAAA GTAATCCATA CTGTGAAGTC AGCATGGGCT CCCAAAGCTA
  TACCACCAGG ACCCTGCAGG ACACACTAAA CCCCAAGTGG AACTTCAACT GCCAGTTCTT
  CATCAAGGAT CTTTACCAGG ACGTTCTGTG TCTCACTATG TTTGACAGAG ACCAGTTTTC
  TCCAGATGGT AAGTCTACCT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323874784	CHEV_12_4719258	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs256956277					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:4762452 () rs orientation: forward

Symbol	Name	Function Class
Fam228a	family with sequence similarity 228, member A	1218 bp downstream
Gm53750	predicted gene, 53750	205 bp upstream
Itsn2	intersectin 2	within coordinates
Rr260649	regulatory region 260649	349 bp proximal
Tssr112576	transcription start site region 112576	109 bp downstream
Tssr112577	transcription start site region 112577	75 bp downstream
Tssr115645	transcription start site region 115645	194 bp upstream