rs256970989 SNP Detail

Summary

• ID
  rs256970989
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:5347854 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ATCACCCAC AGACTAatat acacatgcat
  acatatatac atgcatacat gcatatacac acatactcct tctctctctc tctccccctc
  tctcccctcc tctcccctcc cctcctctcc tctcctctcc tctcctctcc tctcctctcc
  C
  attctctcct ctcTGAGTCA GCCTGTGATC TCCTGTACCA ACTGCACCCA CAAATGAACT
  GGAGAACTAA ATGCCTGTGC AAAACCATGT GACTTTCAGA GTTTGAGCTA GACACCACAG
  CACAGTGTCA ACTACATTTG GAATGAAGAT                                 
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325518181	CHEV_18_5347852	CHEVERUD	SCREENING_POP	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs256970989					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:5347854 () rs orientation: forward

Symbol	Name	Function Class
Gm50064	predicted gene, 50064	404 bp downstream
Gm52372	predicted gene, 52372	1160 bp upstream
Gm58537	predicted gene, 58537	within coordinates
Rr370337	regulatory region 370337	529 bp downstream