rs256979566 SNP Detail

Summary

• ID
  rs256979566
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:83571954 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGCCATCTT CGCTTTCATT
  TATTTTTACT CTGTGTACGG GTGCTTTTCC TGCACTTGTG TCTGCTCGCT GTGCGGTCGG
  TCAGTACTGG GAGAGGGCCT CAGTGTGCAT GTGGAAGTCA TAGGACAATG GGGTCCTGGG
  TTCAAACTCA GGTTTGGCAA GAAGCACCCT TACCTTTCAC TCAGCAACTT TTTAAAAATC
  R
  TGTGAATGTG AGGGTAGGGT CTGCACATAT GAGTGCAGTC GGTGCCTTAC AGAGCCAGAA
  GAAACTGTTG GATCCCCTGG AGTTTGAGTT AACAAGTAGG TATGAGCCAC CTGATGTGGG
  GGGCTGGGAA CTGAACTCAG GTCATCTGCT AGAGCAGTGT GTGCTCTCTC TTTAAACTGC
  CATATCTCTA CTCCTTGTTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324113668	CHEV_12_84866130	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs256979566					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:83571954 () rs orientation: forward

Symbol	Name	Function Class
Dcaf4	DDB1 and CUL4 associated factor 4	within coordinates
Rr257993	regulatory region 257993	554 bp distal
Rr265648	regulatory region 265648	846 bp proximal
Rr387528	regulatory region 387528	1745 bp upstream
Tssr114259	transcription start site region 114259	863 bp upstream