rs256982199 SNP Detail

Summary

• ID
  rs256982199
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:88901728 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATAGGAACC ATCAGTGTGT
  GTGGGGGGGG GGGTCTATGA GGATGCATCC CAAACCCTGG CTTTCCTCCA ATCACCTGTG
  CTTCACACCT TGGCTTGTTC CAGAAAGCTG CAAAATTGCA AGGAGAGTCA ACAAAACCAG
  TCTACATCCC TAAGATAGAT CTGGATCATG ATTTGATAAT GGGAATCTAC CAAGGGGCGG
  Y
  GGACCTCAAG AGTGAACTGA AGCACTCCAT TAAGAAGCTA CAGAAGAAGT CTGAGGAGCA
  CAATGGCTCA GGTAACAGCG GTGACACATC CATCACTGAC GATGAGCAGA ACATTGGCCC
  TTGAATTTCA AGGGTCCTGA AACCGTCTCT GCTTTGTCCT GACGTCACAG CTACTTTTCC
  AGAAAGAGGA TTGAGGCTTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323783767	CHEV_11_88872216	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs256982199					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:88901728 () rs orientation: forward

Symbol	Name	Function Class
Trim25	tripartite motif-containing 25	within coordinates
Tssr104066	transcription start site region 104066	within coordinates
Tssr104067	transcription start site region 104067	67 bp upstream