rs257000239 SNP Detail

Summary

• ID
  rs257000239
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:126920076 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGCTACCAT GTGTATGGTT
  GTAACTACCA TATAGTGGAG CATTTGTCCT TATTACATGT TGGAGAATCT GGGTATATAC
  CCAGGAGTGG TATTGCTGGG TTCTCTGATA GTACTATGTC CAATTTTCTG AGGAACCGCC
  AAACTGATTT CCAGAGTGGT TGTACCAGCT TGCAATTTCA CCAGCAATAG AGGAGTGTTC
  Y
  TCTTTCTCCA CATCCTCGCC AGCATCTGCT GTCACCTGAG TTGTTGATCT TAGCCATTCT
  GACTGGTGTG AGGTGGAATC TCAGGATTGT TTTGATTTGC ATTTCCCTGA TGACCAAGGA
  TGTTGAACAC ACATGGTGGG ACTCATGGCT TCAGCTGCAT ATGTAGCCAA GGGGACATCA
  ATGGGGGGAG AGGCCCTGTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320499206	CHEV_2_126903892	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs257000239					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:126920076 () rs orientation: forward

Symbol	Name	Function Class
Blvra	biliverdin reductase A	within coordinates
Rr38145	regulatory region 38145	76 bp distal
Tssr19977	transcription start site region 19977	764 bp upstream