rs257005681 SNP Detail

Summary

• ID
  rs257005681
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:98217800 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ccatcctcg gatatatagc ccatcttctt
  tgacaaaaga tctctcacct ggatctgagg ctgatcaatt agactagatt ggctgtccag
  caaggctcag ggatagttct gcctctgctt ccTAATTATa cacacacaca cacacacaca
  Y
  acacacacaT ATATATATAC TTTATATCAT GTACATATAT CAAGACTGTC TCAAAAAGAA
  AAGCCAACAG AGAAAACACA GTCCAAGGGG GAGACCCCTG CCTGGTCATA CTCTATTATA
  CTAACGGgtt ttatcccctt cccaccactt                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325906550	CHEV_X_96369533	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs257005681					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:98217800 () rs orientation: forward

Symbol	Name	Function Class
Rr692640	regulatory region 692640	1478 bp distal