rs257009230 SNP Detail

Summary

• ID
  rs257009230
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:137641197 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACTCT GATCCTTGCT GGTTCAGCAC
  K
  GCCCCGGCTC GGGCATGCGC AGTCT                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321368873	CHEV_4_137469801	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs257009230					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:137641197 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15141	CpG island 15141	within coordinates
Ece1	endothelin converting enzyme 1	within coordinates
Rr602776	regulatory region 602776	within coordinates
Rr602777	regulatory region 602777	14 bp proximal
Tssr39791	transcription start site region 39791	347 bp downstream
Tssr39792	transcription start site region 39792	322 bp downstream
Tssr39793	transcription start site region 39793	158 bp downstream