rs257024385 SNP Detail

Summary

• ID
  rs257024385
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:53250787 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CATAT ACATATAAGT CAAGTAGATA
  Y
  ATACATATTC ATGCATATGT ATATA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322963136	CHEV_9_53147592	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs257024385					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:53250787 () rs orientation: forward

Symbol	Name	Function Class
Exph5	exophilin 5	within coordinates
Tssr85124	transcription start site region 85124	1144 bp upstream
Tssr85125	transcription start site region 85125	1573 bp upstream
Tssr85126	transcription start site region 85126	1595 bp upstream
Tssr85127	transcription start site region 85127	1722 bp upstream
Tssr85128	transcription start site region 85128	1740 bp upstream
Tssr85129	transcription start site region 85129	1767 bp upstream
Tssr85130	transcription start site region 85130	1854 bp upstream