rs257031615 SNP Detail

Summary

• ID
  rs257031615
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:24560758 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGTGGATTT TTCCTTTGAT
  GAGTATGAAA TGTCTTTTCT TATCTTTTTT GATAACTTTT AGTTAAAAGT CAATTTTATT
  CAATACTGGA ATGGCTGCTC CAGCTTGTTT CTTGGGACCA TTTGCTTGGA AAAATTTTTT
  CCTGCCCTTT CCTCTGTGGT AGTGTCTGTC TTAGTCACTG AGTGGGTTTC CTGTATGCAG
  Y
  AAAATGCTGG GTTCTGTTTA CATATCCAGT CTGTCAGTAG TTTTTTTTTT TTTTATTGGA
  GAATTGAATC CATTTGTGTT AGGAGATATT AAGTAAAAGT GATTGTTGAT TTCTGTTATT
  AAATATGGAA CTATGTTTGT GTTGTTTTCT TCTTTTGGGT TTGTTGAAAG AAGATGACTT
  TGCTCTCCCT AGGGTTTCCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324295914	CHEV_13_24468644	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs257031615					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:24560758 () rs orientation: forward

Symbol	Name	Function Class
Cmah	cytidine monophospho-N-acetylneuraminic acid hydroxylase	within coordinates
Gm11342	predicted gene 11342	825 bp upstream
Rr476038	regulatory region 476038	1714 bp distal
Rr476039	regulatory region 476039	836 bp distal
Rr476040	regulatory region 476040	682 bp distal
Tssr4016	transcription start site region 4016	714 bp downstream
Tssr118892	transcription start site region 118892	730 bp downstream
Tssr118893	transcription start site region 118893	666 bp downstream
Tssr118894	transcription start site region 118894	630 bp downstream
Tssr118895	transcription start site region 118895	578 bp downstream
Tssr121784	transcription start site region 121784	816 bp upstream
Tssr121785	transcription start site region 121785	803 bp upstream
Tssr121786	transcription start site region 121786	742 bp upstream