rs257042010 SNP Detail

Summary

• ID
  rs257042010
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:19599273 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAGCTCCAA CAAGCCACAG
  GCTCCTGTGC TGTGATATTT GGCTGAAGTA CTTGGGGCCA AGAACCTATG AGCTGAATGA
  ACTGTTTAAT AAAGAATCAA AATATATTCT TCATTCTATG CTAAGCATTC TGTCACAGTG
  CTAATAAAAC TAATATAGGC CAGCAGTTTG GCTCAGTGAG TAAAGGTGCC TGCCACCAAG
  Y
  TTGACAACCT GAGTTCTGTC CCCAGGACCT ACCTGGTGGA AGTAGAGAAC TGACTTCTGC
  AAGTTTCCCT CTGACATCCA CAGATACAGG TGTGGTTGGG GGGGGGGGGT AATATATATG
  TAATATATAA TGTATATATG TGTTATATAT ATATGAAATA AAAGTTTTCA ACCCTCTAAT
  ACAACACTCC CCTCTATCTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323588542	CHEV_11_19549276	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs257042010					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:19599273 () rs orientation: forward

Symbol	Name	Function Class
D11Hjk21	DNA segment, Chr 11, H. Jockusch 21	1925 bp proximal
Gm12027	predicted gene 12027	within coordinates
Rr249245	regulatory region 249245	1929 bp proximal