rs257058449 SNP Detail

Summary

• ID
  rs257058449
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:99778932 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTCCTGAGTT CAATTCCCAA
  TAGTGGAATT AATCCCAAGG TTAGTACTTT TAGTGACTAA AGGTTAGTAC GTGGGTCACA
  CATGTTCATC TGACCCCAGC CATCTGTAAT GGGACTGATA TCCTCTTCTG GTGTGTCTGA
  AGATAGTGAC AATGTACTCA CATGCATAAA AAAAATTTTT TTTTAATCCC AAAGAATGAA
  W
  ATATATATAT TGGAGTTTCA GGGCAAATAG ACTACAGCAG CTCCTAAGGT CACTGCTGCT
  CAACCAGAGG TGTCAGACAA GTTCAAAGGA ATGTAGCTGC GCTCTGTGCT TACCTACAAC
  TTCCTGAGTG AAGACTGGAG TTCCTGGCCA GCCTCTGAGG ACTATCTGCA GCTCCCGCTA
  TATACTGCTA TACTGTATAC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325082158	CHEV_15_99711482	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs257058449					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:99778932 () rs orientation: forward

Symbol	Name	Function Class
Gm18095	predicted gene, 18095	248 bp downstream
Gm49494	predicted gene, 49494	within coordinates
Gm63271	predicted gene, 63271	within coordinates
Rr308871	regulatory region 308871	1869 bp proximal