rs257058620 SNP Detail

Summary

• ID
  rs257058620
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:96085780 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TGATGTGCT ATTACTGGAC ACTGCCCTAG
  TGTAAGCCCC AGGAGCAGGA TATTGTCCAC AGCAGTGGCT CAGGCCCCAG TCCTAGCTCC
  CCTCTCCAAT AGCTGTTCTA GGCACAGCAT CGATCTGAGA TCTGGGGGCT CCTTCTCAGA
  K
  GCACCCTCCC TGCGGGCTTA TGTCCCTCCA TATTGCTTCA ACAGGCCTGG GGAAGGACAG
  CCTGGCTCAG TGCCCAGACC CAGCCAGAGA CGCTGGGTGT AGAGAGGATT AGGTGCCCTG
  CCCCAGTGCT GTGCTGTGCT GTGGTATTCC                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322811429	CHEV_8_97883052	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs257058620					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:96085780 () rs orientation: forward

Symbol	Name	Function Class
Mmp15	matrix metallopeptidase 15	within coordinates
Rr1960	regulatory region 1960	within coordinates
Rr668228	regulatory region 668228	1614 bp distal
Rr668229	regulatory region 668229	within coordinates
Rr668230	regulatory region 668230	793 bp proximal