rs257065976 SNP Detail

Summary

• ID
  rs257065976
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:18710793 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTCCTTCTCC CAGCCTCCCT TGTTTTATGA TTAGATTAAT
  TTCCTCCCCG AGGTTGCAAA AGTAGCTGCT AGAATCTCCA GGAACCGAAA TATGGTCTTT
  Y
  AGTTCCGCTC CAACAGAAGA AAGGCGCTAA TCTTTGCCTG AGCAGTTCTA GAGGCAAAAT
  CATGACCCTC CCTTGGGTTT GGGAAGATCT ACTCAATGG                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325733607	CHEV_19_18807919	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs257065976					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:18710793 () rs orientation: forward

Symbol	Name	Function Class
Gm23238	predicted gene, 23238	525 bp downstream
Gm50202	predicted gene, 50202	within coordinates
Tssr155457	transcription start site region 155457	1989 bp downstream
Tssr155458	transcription start site region 155458	686 bp downstream