rs257090900 SNP Detail

Summary

• ID
  rs257090900
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:61861812 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGTGGGTGG GTAGATGGAT
  AGATAAGAAT AGATGGGTAG CTAAATGATA AAACCAGGTA GATGGATGAC AACTTTATCA
  ATAGCTAAAT AGACGACTGT ACCAATGAGT GAATAGGGAG ACAGCCTGTA CAGATAGGTA
  GGTGGGGTCC GTTAATTCTC TGTCACTCTA ACATCTACAT GGAGGTGATC ATCTGAAGAA
  M
  AAAGGTTCAT TTGGCTTCTG GCTTTGGAGA GCACCTGGCC TTTTGCTTTT AGGCCTATGC
  TAAGGCAGCA TACCATGGAA GGAACATCTG GCAGAACAAA ACCACTCATC CCATGGTGGG
  AAAGAGGTAG TCCAGGCTAG CTCATTTGAA CCCAGGAGAG GGTCCACATC TGGGCTAAAC
  AACCCATCAG CTAAGAGCCC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323330461	CHEV_10_61488781	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs257090900					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:61861812 () rs orientation: forward

Symbol	Name	Function Class
Gm47919	predicted gene, 47919	418 bp downstream
Gm66887	predicted gene, 66887	921 bp downstream
Rr432503	regulatory region 432503	1361 bp distal