rs257121624 SNP Detail

Summary

• ID
  rs257121624
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:149147116 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCTTGTTTA TATTGTATAA
  CCACAGGTCA ATGATCAGTG TTTGAATCAG ATTCCCATGG GTGACCTGTG TAATAGTTCA
  TCTTTTCACA CTGGGATGAA AGACAATAGA GGAAGTTTGA AGCTACCACA AACAGGCAGA
  CAGAAGGAAG GCTGCTCTCA CTTCTCTGTA AGGAGGGAGT CTTTTCTTTG CCTCACAAAG
  K
  GGGCAACACC TATGACATAA AAACAGTTAA CTGTGCTGAG TGGCACACAG TCAGCATATT
  TAAATATTCC CTATCATGCT ATCTGTCATC TACTCCTGCT TTGTAAATGG GTTGGTGATA
  TTTTGTCTGG GGAAATTTCC ATACAGATGT TCCTAGTGAA TAGAACGGCA GAAGAAAGGG
  CTATTTCAGA CTGCATTTGA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321018985	CHEV_3_149104443	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs257121624					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:149147116 () rs orientation: forward

Symbol	Name	Function Class
A630039O03Rik	RIKEN cDNA A630039O03 gene	1875 bp upstream
Gm30382	predicted gene, 30382	within coordinates