rs257152127 SNP Detail

Summary

• ID
  rs257152127
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:117584721 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTTTCTTTT TTTTTTTTTT
  CCGAGACAGG GTTTCTCTGT GTGGCCCACG CTGTCCTGGA ACTCACTCTG TAGACCAGAC
  TGGCCCGGAA CTAAGAAATC CGCCTGCCTC TGCCTTCCAA GTGCTGGGAT TAAAGGAGTG
  CCCCACCATT TTCGGCTTCC CTGTTTTCAA AGCTCACCAG CTCTTACTGT TTGCTAGAAA
  Y
  AGTCCCATTG TCACCCTCCC CTACACGTGT GTGGATTACC CTTCCCTGCT CCCTCAGTAA
  GAGCCTGGGA AGTGTTCTGG CTAGGTGTGA TGGAGTACAG TTTCAGTCCC AGTCCCAGGA
  GTGGGAGGGC AGAGGCCTGT GGATCTCTGC CAGTTCAAAA GAGTTCCATG AGTTCCAGGA
  CGGCCAGGGC TGCATGGTGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323499205	CHEV_10_117185872	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs257152127					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:117584721 () rs orientation: forward

Symbol	Name	Function Class
Gm66856	predicted gene, 66856	793 bp downstream
Nup107	nucleoporin 107	1805 bp downstream
Rr439612	regulatory region 439612	1975 bp distal