rs257162764 SNP Detail

Summary

• ID
  rs257162764
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:37463480 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATAGG AAATCGTTTG GGGGCCAAAA
  R
  ATACCAAGGG AAAGGACTAG CACAC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322907347	CHEV_9_37359769	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs257162764					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:37463480 () rs orientation: forward

Symbol	Name	Function Class
Cpgi21585	CpG island 21585	221 bp proximal
Nrgn	neurogranin	within coordinates
Rr676716	regulatory region 676716	within coordinates
Rr676717	regulatory region 676717	710 bp proximal
Tssr88858	transcription start site region 88858	480 bp downstream
Tssr88859	transcription start site region 88859	541 bp downstream
Tssr88860	transcription start site region 88860	771 bp downstream
Tssr88861	transcription start site region 88861	1207 bp downstream