rs257178829 SNP Detail

Summary

• ID
  rs257178829
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:124749962 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGAGG TGGCTCAAAG TTAGGAGTAC
  W
  GCTGCTCTCA GAGAGGACCT GGGCT                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322855978	CHEV_8_126547123	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs257178829					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:124749962 () rs orientation: forward

Symbol	Name	Function Class
Cpgi21265	CpG island 21265	1377 bp distal
Gm45732	predicted gene 45732	1849 bp downstream
Mir1967	microRNA 1967	501 bp downstream
Rr672605	regulatory region 672605	1336 bp distal
Taf5l	TATA-box binding protein associated factor 5 like	1826 bp upstream
Tssr80013	transcription start site region 80013	1708 bp downstream
Tssr80014	transcription start site region 80014	1693 bp downstream
Tssr80015	transcription start site region 80015	1644 bp downstream
Tssr83424	transcription start site region 83424	1778 bp upstream
Urb2	URB2 ribosome biogenesis 2 homolog (S. cerevisiae)	within coordinates