rs257180332 SNP Detail

Summary

• ID
  rs257180332
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:72616044 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TTTGCTCTG GCGTGTTTTA TTGTTCCTCT
  GTAAAGTTTA AAGTTCAAGC ACAGGAAGGT CTTTGTGGGC CAAGCATGAA ACGCAAACGC
  GTTTTCTTTC AACATGCGGG TCATCACTAC CTTCACAGCA GGACACCTCT GCTACCTGTC
  R
  GGACTGAGTT TTAAAAGGTA CATTTGTATT TCCAGGAAAT GTTTGAGTCT ATAAAGAAGT
  CATTCTTTTA AACCTCAAAA TGTAATAGGA AGCCATGAAC TTTCGCAAGC CAGGCCACAA
  ATGTTTGCCC TACAGTATTG ATGCAGTCTG                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320343721	CHEV_2_72623757	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs257180332					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:72616044 () rs orientation: forward

Symbol	Name	Function Class
6430710C18Rik	RIKEN cDNA 6430710C18 gene	within coordinates
Gm39848	predicted gene, 39848	718 bp downstream
Rr559035	regulatory region 559035	within coordinates