rs257207744 SNP Detail

Summary

• ID
  rs257207744
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:34485365 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTAGTCACT TGTCCTGCCA
  TGACAAAGAA CCTAATGAAA GCAATTAATG CAATTAAAGA TGATTTGGGT CCCCAGTTCA
  GGCTACGGTC ACAGCTGCAG GAGCTTGAGC AGCTGGTCAC ATGGCATCCA ATCAGGAAGC
  AGAGGTGTGG TTGCTGTTGC TTGGTTTGCT TATCCAGACC ACGGGGTGGT ATTGCTCACA
  Y
  ACAGGTTAGG TGGAAGACCT TCGCAATTAA GACCAGCCCA GTTAACCTAA TCCAGAAACC
  CCATCACATG GCTCGTATTT GTTTCCATGG TGACTCTAAA TCCTGCCAGG TTGACAGTCA
  AGATCAACCA CTATAAGAAC TCACACTGAG CAGTGCCTTC TGGAAGATTC CTTCTAAAGG
  TGCAGAGTTA AGTAGCCTCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320701739	CHEV_3_34330138	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs257207744					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:34485365 () rs orientation: forward

Symbol	Name	Function Class
Gm20515	predicted gene 20515	within coordinates
Rr575127	regulatory region 575127	1447 bp proximal