rs257286305 SNP Detail

Summary

• ID
  rs257286305
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:56265237 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTATGTTGC CCTGTAGTTT
  TTCAATTGTA GGACCTGCTC CTTCATATTC CAGCAGTTCA TCAGTGGGGT AGATGTTGGA
  ATGAGCCAAT TCAAAGCCCT GGATCTGGGC CTGAAAGGTT TCCTAGCTGT TTAGCCTGCT
  GAGTCTCTCG TGCCTTTGGA GTTAGCTCAC CAGCAAATCC TCCAGCCGGG GCCGGTTCTA
  Y
  CCCACTGGCC AGGTGAGGTG CAGGGCCTGC CCTCCCGAGT GCTGCAGCAG GTGAGGGGCA
  GGGAGAGCTT TCTTGTTCTG ATGACCCCAA GGCCAGGGCT TCCATCTGCC CTGGTGGTGA
  AGGATAGAGG GTAAGAGGGT AGGAGGTTGT CTCTCTCCCT CATCCATGCC ACCACATAGA
  AGATGAGCAG TAGGGCCAGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325856832	CHEV_19_56351295	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs257286305					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:56265237 () rs orientation: forward

Symbol	Name	Function Class
Gm22271	predicted gene, 22271	713 bp downstream
Gm32257	predicted gene, 32257	within coordinates
Rr549993	regulatory region 549993	547 bp proximal
Rr549994	regulatory region 549994	777 bp proximal
Rr549995	regulatory region 549995	1197 bp proximal
Rr549996	regulatory region 549996	1223 bp proximal
Rr549997	regulatory region 549997	1287 bp proximal