rs257314301 SNP Detail

Summary

• ID
  rs257314301
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:122671401 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGGCTTGGA GCATGCCCTA
  GTTATTTGCA ATACCTCTTA GTCCCTTTAG CCCCCGAGTT ACACAGAGTT AAATGACTCA
  CTTGGGATCA CCAGATACCA GAGATATTGT ACAAATCAGA ACGGAAGCCA ACCATGTTGC
  CTCTTAAAGC CACCCTAAGA CTGCACCACC ATTAAATCTC ACCTGGGACA GTATGAGAAT
  Y
  TACTTACGGG CACAGTTGCT GTGTTCCTCT GCACAGGAAT GCTGGAAACG CCAGCGCTGT
  GGCCCTGTGG CACAGAGAAG TCCCACATGC CTGAGGATGG CTAAGGGCTT GCGGGGGTCT
  CTCCTGAGCA TCTTGGCTCT GAGCAGCACG GGGTAGTGGC CCACTGTATG CCCTTGCTTT
  GGTCAGGGCC ACCTCAGAGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322846795	CHEV_8_124468562	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs257314301					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:122671401 () rs orientation: forward

Symbol	Name	Function Class
Car5a	carbonic anhydrase 5a, mitochondrial	within coordinates
Rr671979	regulatory region 671979	1293 bp distal
Rr671980	regulatory region 671980	232 bp proximal
Tssr83252	transcription start site region 83252	187 bp downstream
Tssr83253	transcription start site region 83253	224 bp downstream