rs257341240 SNP Detail

Summary

• ID
  rs257341240
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:109530238 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CTCCGATCG TGGAAGACAC AGCCTAACCT
  TGTCAGAAGC CACCTTCTGT GCCCCCAGCA CCACGTGTCT GGGCCACGTG AGCAACGCCA
  CGTGGGCCTG ACGTGGAGCT GGGGCCGCAG GGGTCTGATG GCCTCCTGTT TCAGAATCTG
  R
  GGCGTTTATC ATCCTTGGGA CAACTGCTGA CCTGGCTCCG GAAGATTGTC CACACAAGTC
  TGAGTGACGG AGTGAGATGA GGGGGCGGGT GGAGATGCTC AGAAGAAAAC AGCCTTTGCA
  TGGGGTTCAT TTCCAGCTGT TTAGAGAGTC                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324156106	CHEV_12_110802014	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs257341240					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:109530238 () rs orientation: forward

Symbol	Name	Function Class
Meg3	maternally expressed 3	within coordinates
Mir770	microRNA 770	19 bp downstream
Tssr115120	transcription start site region 115120	860 bp upstream
Tssr115121	transcription start site region 115121	895 bp upstream
Tssr115122	transcription start site region 115122	1090 bp upstream