rs257344756 SNP Detail

Summary

• ID
  rs257344756
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:11507036 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CTCCAACAT GGAATCAAAG GTACTTTGTA
  ACCCCTCATA TGAGGAACAA TTGGTTTGTT AAGAaaaaca aaacaaaaca aaactaaata
  ccacaaaaAC AAATGGAACT ATACCGCAGA AGATATGTCT TCATGATAAT GCAGAAATTC
  Y
  AACCATCACA GGGTAGCAAT GCTTGCTACT TAAAATGTAG ACTGTTCATA CAGTGGGTAC
  CAGTATGAGT TGAATGTGTG TATTACTGGC ACCCTATTGA TTTTCATGAC CTTGGCTTCA
  GCCAAAGCCC AGACCTACAA ATGGTGGCCT                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325721060	CHEV_19_11604162	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs257344756					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:11507036 () rs orientation: forward

Symbol	Name	Function Class
Ms4a6b	membrane-spanning 4-domains, subfamily A, member 6B	within coordinates
Ms4ac	membrane-spanning 4-domains, subfamily A cluster	within coordinates
Tssr155256	transcription start site region 155256	1070 bp downstream
Tssr155257	transcription start site region 155257	1260 bp upstream
Tssr155258	transcription start site region 155258	1600 bp upstream