rs257354991 SNP Detail

Summary

• ID
  rs257354991
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:141388745 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACATTCTAG CCACCTCTAG
  CAGAACCCTT GATACTCACC CCCAGAAAAC CACCTGGGGG CGGGGCACTT CTTTGGAGGA
  TGTTCCTGCT AGCCTGGATG CCGCACCGCG CAGCCTTCTT TCTCTGAGAA GACTATCAGT
  CTGCCAAGGC TTAGTGAGGG CCTCCCAGTC TCTACCAACA CAGAGTCTTC TGGAAGACAA
  A
  GGCTGCTGTT TAAAAGGTTC CTTGTGTGTT GGTGCAGGGA GACACGCACA CAGGCATGCA
  GCGCTGGTGT ACAGGCGGTA GTTAGCCACT CAGCTTAGGA GCTAGGACCC TGACTTAGAT
  TCTCTGGAAA AGAGGCCAGT GCTCTTAGCC ACTGACCTGG CTATCTGTCC AGCAGCATTT
  TTTTTTGTTT TGTTTTGTTT                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321388819	CHEV_4_141217349	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs257354991					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:141388745 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15240	CpG island 15240	1750 bp proximal
Gm70264	predicted gene, 70264	396 bp upstream
Plekhm2	pleckstrin homology domain containing, family M (with RUN domain) member 2	within coordinates
Rr603849	regulatory region 603849	1480 bp distal