rs257356055 SNP Detail

Summary

• ID
  rs257356055
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:103061500 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CGCGG ATTGGTTGGA CAATCTTCCG
  Y
  CCGGGGGTCT GCCTCCTCCA GGCTC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323834911	CHEV_11_103031988	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs257356055					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:103061500 () rs orientation: forward

Symbol	Name	Function Class
Cpgi3957	CpG island 3957	within coordinates
Fmnl1	formin-like 1	433 bp upstream
Gm51919	predicted gene, 51919	164 bp upstream
Rr403012	regulatory region 403012	1580 bp downstream
Tssr105316	transcription start site region 105316	247 bp downstream
Tssr105317	transcription start site region 105317	178 bp downstream
Tssr105318	transcription start site region 105318	53 bp upstream
Tssr105319	transcription start site region 105319	83 bp upstream
Tssr105320	transcription start site region 105320	172 bp upstream
Tssr105321	transcription start site region 105321	289 bp upstream
Tssr105322	transcription start site region 105322	318 bp upstream
Tssr105323	transcription start site region 105323	407 bp upstream