rs257385980 SNP Detail

Summary

• ID
  rs257385980
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:110357501 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGGTATTGT TCTCAATTCC
  AAACTTTTGC TTGTGGTCCA AATTACTTGG TATGAAACTG CATGGTTATT AACAGGCATG
  TACGTGCCCT CTCTTCCTTT TATAACTAAT AACTAAGCTC AGGTCATACA TGTTGATATT
  TTTAATCAGT CTACAAAGAA TAATCTTTAC AGTCAGATTT GAAGGCCTCA AAACCCCCAA
  W
  TAAAAGACAC ATACCCTCCC TTAGCATTTT GTCTCAGATG TTTTATGTAG ATATGAATTC
  AAAACTGGAT AGAACTATAC TCTGAATGCA CAGACACAGC ATAAATATCG CTAAATTCAT
  TCATCATTCA TTCATCAGAT TAAAAGCATC TTTACATCAT TATTATGATC CAGGAGGTCT
  GCCTGGCACC AGGAATTCTA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323463782	CHEV_10_109958696	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs257385980					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:110357501 () rs orientation: forward

Symbol	Name	Function Class
D10Mit150	DNA segment, Chr 10, Massachusetts Institute of Technology 150	1591 bp proximal