rs257403297 SNP Detail

Summary

• ID
  rs257403297
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:12327566 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATGTGTGTG TGTGTGTGTG
  TGTGTGTGCG TGTTTCTGTC ACACAGCTCT ATAGTTTGTG TTAACAAGTG AATATTCTGT
  ATAATGTACC GCACCAGCTC TGAGACTCTG ACCTCCCTTC CCAGAATTCC TTCCTGATGC
  TATTCACTCA TTGGCCCTTC CACATTAACC CTGAAACATC AGTTTTTGTT GCTGATGGCT
  R
  AGCATCTGCT CAGATAGACC AGTCCTTGGT GAATGGCTAG ACAAACCATC CCTCTGTCCT
  TGGAGTCAGC CTGTCCACTG GTTTTACTAA GAACCAGGGA CCAGTGTTTT CCTTAGCCCT
  GTAGTCTCAG TCTGTGCCCA CACTCAGGAG GCTAGCATGC CAAACTGACT GACTGATTTT
  AGGCTTAACG TTTCCAACTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322497650	CHEV_8_12277566	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs257403297					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:12327566 () rs orientation: forward

Symbol	Name	Function Class
A230072I06Rik	RIKEN cDNA A230072I06 gene	1259 bp upstream
Rr659697	regulatory region 659697	993 bp proximal